Selected Publications
  1. A. Sarje, J. Zola and S. Aluru,"Accelerating Pairwise Computations on Cell Processors," IEEE Transactions on Parallel and Distributed Systems, to appear.
  2. A. Sarje and S. Aluru, "Parallel genomic alignments on the Cell broadband engine," IEEE Transactions on Parallel and Distributed Systems, Vol. 20, No. 11, pp. 1600-1610, 2009.
  3. J. Zola, A. Sarje and S. Aluru, "Constructing gene regulatory networks on clusters of Cell processors," 38th International Conference on Parallel Processing (ICPP), 2009.
  4. A. Janowczyk, S. Chandran and S. Aluru,"Fast, processor-cardinality agnostic PRNG with a tracking application," 6th Indian Conference on Computer Graphics, Vision and Image Processing, pp. 171-178, 2008.
  5. A. Sarje and S. Aluru,"Parallel biological sequence alignments on the Cell broadband engine," Proc. 22nd IEEE International Parallel and Distributed Processing Symposium (IPDPS), pp.2008.

















Cystorm

Cystorm computer

The Blue Gene Project

ISU Blue Gene super computer

Handbook of Computational Molecular Biology

Aluru's book cover